STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS56036.1Histidine kinase. (487 aa)    
Predicted Functional Partners:
SDS55978.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.967
SDT39999.1
Two-component system, NarL family, response regulator DevR.
  
  0.855
SDS58743.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.851
SDS13343.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.845
SDT43607.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.838
SDR72037.1
Response regulator receiver domain-containing protein.
  
  0.835
SDS82766.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.835
SDS82881.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.835
SDT39093.1
Two-component system, NarL family, response regulator DevR.
  
  0.833
SDT42367.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.832
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.