STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS76760.1alpha-L-fucosidase. (425 aa)    
Predicted Functional Partners:
SDT29062.1
Hexosaminidase.
  
 0.787
SDT09951.1
alpha-L-fucosidase.
 
     0.687
SDS61381.1
Hypothetical protein.
  
     0.676
SDT17138.1
Protein of unknown function.
  
 
  0.605
SDS76834.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
       0.557
SDR72005.1
Protein of unknown function.
 
     0.555
SDR77362.1
Beta-galactosidase.
   
 0.517
SDS76667.1
Hypothetical protein.
       0.453
SDR86660.1
Sialidase-1.
  
     0.441
SDS57354.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
     0.434
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.