STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS88544.1Two-component system, OmpR family, response regulator MtrA. (240 aa)    
Predicted Functional Partners:
SDS88513.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 0.993
SDS98037.1
PAS domain S-box-containing protein.
  
 0.980
SDR72067.1
Signal transduction histidine kinase.
 0.965
SDR79414.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 0.962
SDS58272.1
GAF domain-containing protein.
  
 0.962
SDT37560.1
Two-component system, OmpR family, sensor kinase.
 0.933
SDT06837.1
PAS domain S-box-containing protein.
 
  0.904
SDT40430.1
Two-component system, OmpR family, sensor histidine kinase MprB.
 0.891
SDS95563.1
Signal transduction histidine kinase.
 
  0.887
SDT25685.1
Signal transduction histidine kinase.
 
  0.886
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.