STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS88966.1SWIM zinc finger. (444 aa)    
Predicted Functional Partners:
SDS88753.1
VWA domain containing CoxE-like protein.
     0.970
SDS88852.1
Hypothetical protein.
 
     0.959
SDS88928.1
MoxR-like ATPase.
 
     0.953
SDS88949.1
Hypothetical protein.
       0.827
SDS88575.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
       0.563
SDS88605.1
Hypothetical protein.
       0.563
SDS88634.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
       0.563
SDS89000.1
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.518
SDS89035.1
Drug resistance transporter, EmrB/QacA subfamily.
       0.465
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.