Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR93187.1 | SDS45259.1 | SAMN04488543_0774 | SAMN04488543_1755 | FMN reductase. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.850 |
SDR93187.1 | SDS45331.1 | SAMN04488543_0774 | SAMN04488543_1757 | FMN reductase. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.836 |
SDR93187.1 | SDS46990.1 | SAMN04488543_0774 | SAMN04488543_1792 | FMN reductase. | Taurine dioxygenase. | 0.784 |
SDR93187.1 | SDS96263.1 | SAMN04488543_0774 | SAMN04488543_2731 | FMN reductase. | FMN reductase. | 0.803 |
SDR93187.1 | SDS96713.1 | SAMN04488543_0774 | SAMN04488543_2737 | FMN reductase. | FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. | 0.458 |
SDR93187.1 | SDS96775.1 | SAMN04488543_0774 | SAMN04488543_2738 | FMN reductase. | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase). | 0.458 |
SDR93187.1 | SDS96968.1 | SAMN04488543_0774 | SAMN04488543_2742 | FMN reductase. | Alkanesulfonate monooxygenase. | 0.928 |
SDS42952.1 | SDS96775.1 | SAMN04488543_1713 | SAMN04488543_2738 | NAD(P)H-dependent FMN reductase. | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase). | 0.437 |
SDS42952.1 | SDS96968.1 | SAMN04488543_1713 | SAMN04488543_2742 | NAD(P)H-dependent FMN reductase. | Alkanesulfonate monooxygenase. | 0.660 |
SDS45259.1 | SDR93187.1 | SAMN04488543_1755 | SAMN04488543_0774 | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | FMN reductase. | 0.850 |
SDS45259.1 | SDS45331.1 | SAMN04488543_1755 | SAMN04488543_1757 | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.999 |
SDS45259.1 | SDS46990.1 | SAMN04488543_1755 | SAMN04488543_1792 | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | Taurine dioxygenase. | 0.752 |
SDS45259.1 | SDS96263.1 | SAMN04488543_1755 | SAMN04488543_2731 | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | FMN reductase. | 0.759 |
SDS45259.1 | SDS96968.1 | SAMN04488543_1755 | SAMN04488543_2742 | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | Alkanesulfonate monooxygenase. | 0.803 |
SDS45331.1 | SDR93187.1 | SAMN04488543_1757 | SAMN04488543_0774 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | FMN reductase. | 0.836 |
SDS45331.1 | SDS45259.1 | SAMN04488543_1757 | SAMN04488543_1755 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.999 |
SDS45331.1 | SDS96263.1 | SAMN04488543_1757 | SAMN04488543_2731 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | FMN reductase. | 0.738 |
SDS45331.1 | SDS96968.1 | SAMN04488543_1757 | SAMN04488543_2742 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Alkanesulfonate monooxygenase. | 0.805 |
SDS46990.1 | SDR93187.1 | SAMN04488543_1792 | SAMN04488543_0774 | Taurine dioxygenase. | FMN reductase. | 0.784 |
SDS46990.1 | SDS45259.1 | SAMN04488543_1792 | SAMN04488543_1755 | Taurine dioxygenase. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.752 |
page 1 of 4