STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT08663.1Two-component system, OmpR family, sensor histidine kinase KdpD. (845 aa)    
Predicted Functional Partners:
SDT08697.1
Two-component system, OmpR family, KDP operon response regulator KdpE.
 0.994
SDR72067.1
Signal transduction histidine kinase.
 
0.893
SDS98037.1
PAS domain S-box-containing protein.
 
 0.878
SDS98328.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.866
SDS93732.1
Sensor domain CHASE3-containing protein.
    
 0.855
SDR79446.1
Two-component system, OmpR family, response regulator RegX3.
 
 0.854
SDT09174.1
Adenylate and Guanylate cyclase catalytic domain-containing protein.
 
 0.748
SDT06813.1
Response regulator receiver domain-containing protein.
 
 0.741
SDS95631.1
Two-component system, OmpR family, response regulator.
 0.737
SDT07231.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.737
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.