STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT09951.1alpha-L-fucosidase. (495 aa)    
Predicted Functional Partners:
SDT09919.1
alpha-L-fucosidase.
 
    
0.744
SDS76760.1
alpha-L-fucosidase.
 
     0.687
SDT09782.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.655
SDT09869.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.655
SDT09897.1
Transcriptional regulator, GntR family.
      0.655
SDT32141.1
Hypothetical protein.
  
     0.633
SDT17138.1
Protein of unknown function.
  
 
  0.605
SDS47961.1
alpha-N-arabinofuranosidase.
  
     0.568
SDT31250.1
alpha-L-rhamnosidase.
  
     0.544
SDS15359.1
Glycosyl hydrolases family 2, TIM barrel domain; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.485
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.