STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hldErfaE bifunctional protein, domain I/rfaE bifunctional protein, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. (500 aa)    
Predicted Functional Partners:
SDS23386.1
Phosphoheptose isomerase.
  
 0.982
SDR74809.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
  
 0.954
SDT16396.1
ADP-heptose:LPS heptosyltransferase.
 
 
 0.910
SDT16420.1
ADP-heptose:LPS heptosyltransferase.
 
 
 0.902
SDT16180.1
Glycosyltransferase like family 2.
     0.894
SDR74825.1
ADP-heptose:LPS heptosyltransferase.
 
 0.874
SDR74904.1
ADP-heptose:LPS heptosyltransferase.
 
 
 0.826
SDR74926.1
ADP-heptose:LPS heptosyltransferase.
 
 
 0.811
SDR74841.1
pfkB family carbohydrate kinase.
 
  
 
0.810
SDT26378.1
Hypothetical protein.
 
  
  0.730
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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