STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT22721.1MFS transporter, putative metabolite:H+ symporter. (449 aa)    
Predicted Functional Partners:
SDT22680.1
Quinol monooxygenase YgiN.
       0.668
SDT22660.1
Phosphomannomutase.
       0.540
SDT22748.1
L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.532
SDT22771.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
       0.532
SDT22813.1
2-oxoisovalerate dehydrogenase E1 component.
       0.532
SDT22626.1
Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.529
SDT22830.1
glutaryl-CoA dehydrogenase.
       0.409
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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