STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT24305.1Hypothetical protein. (298 aa)    
Predicted Functional Partners:
SDT24327.1
Rrf2 family protein.
 
     0.625
pheT
phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.592
SDT12124.1
ferredoxin--NADP+ reductase.
     
 0.568
SDS45331.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
   
 0.562
SDS45284.1
Hypothetical protein.
     
 0.559
SDS45259.1
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
 
  
 0.522
SDS44958.1
Sirohydrochlorin ferrochelatase.
     
 0.487
SDT28857.1
Sirohydrochlorin ferrochelatase.
     
 0.487
SDS45027.1
Sulfate adenylyltransferase subunit 2.
 
  
 0.466
SDR71509.1
Serine protease, S1-C subfamily, contains C-terminal PDZ domain.
    
   0.404
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.