STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT35436.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (241 aa)    
Predicted Functional Partners:
SDT35448.1
Predicted dehydrogenase.
  
    0.778
SDS91215.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.773
SDS75179.1
Glutamate synthase (NADH) large subunit.
     
 0.766
SDT35414.1
D-arabinitol dehydrogenase (NADP+).
 
 
  0.690
SDT35394.1
Hypothetical protein.
    
  0.689
SDS67318.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.678
SDT33931.1
Ferredoxin-NADP reductase.
   
 0.634
SDT39065.1
Ferredoxin-NADP reductase.
   
 0.634
SDS91432.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.622
SDT19853.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.523
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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