STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT35448.1Predicted dehydrogenase. (377 aa)    
Predicted Functional Partners:
SDT35436.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
    0.778
SDT35414.1
D-arabinitol dehydrogenase (NADP+).
  
    0.660
SDT35394.1
Hypothetical protein.
       0.651
SDS84906.1
Hypothetical protein.
  
     0.593
SDR78729.1
Acetyltransferase (GNAT) family protein.
  
     0.569
SDT39158.1
Trehalose synthase.
  
    0.496
SDT35464.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
 
     0.478
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
   
   0.451
SDT35381.1
Hypothetical protein.
       0.417
SDT35547.1
D-threo-aldose 1-dehydrogenase.
 
    0.416
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.