STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT39259.1Hypothetical protein. (628 aa)    
Predicted Functional Partners:
SDS43858.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.977
SDS77071.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.937
SDS77141.1
Electron transfer flavoprotein beta subunit.
 
 
 0.904
SDR98506.1
Enoyl-CoA hydratase.
  
 0.835
SDT29207.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.783
SDS81044.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.775
SDT22534.1
Biotin carboxyl carrier protein /biotin carboxylase.
  
 0.769
SDS12874.1
Enoyl-CoA hydratase/carnithine racemase; Non-canonical start codon; manually curated; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.746
SDS77302.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.743
SDT43811.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.736
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.