STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT42388.1Putative ABC transport system ATP-binding protein. (262 aa)    
Predicted Functional Partners:
SDT42410.1
Putative ABC transport system permease protein.
 0.998
SDT32984.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.901
SDS51177.1
FtsX-like permease family protein.
  
 0.835
SDS81331.1
Amino acid ABC transporter membrane protein, PAAT family.
 
 
 
  0.792
SDT25726.1
Outer membrane lipoprotein-sorting protein.
   
 
 0.785
SDT27842.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
 
  0.755
SDT26238.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.684
SDT03589.1
Zinc transport system ATP-binding protein.
 
0.599
SDT25983.1
ABC-2 type transport system ATP-binding protein.
 
     0.588
SDT42354.1
Signal transduction histidine kinase.
  
    0.527
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.