STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU80508.1Peptide/nickel transport system substrate-binding protein. (518 aa)    
Predicted Functional Partners:
SDU80513.1
Peptide/nickel transport system permease protein.
 0.969
SDU80516.1
Peptide/nickel transport system permease protein.
 
 0.966
SDU80527.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.851
SDU80521.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
 
     0.827
SDU85001.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.815
SDU80948.1
Peptide/nickel transport system permease protein.
 0.772
SDU92963.1
Peptide/nickel transport system permease protein.
 0.769
SDU85008.1
Peptide/nickel transport system permease protein.
 0.768
SDU94049.1
Peptide/nickel transport system permease protein.
 
 0.766
SDU94055.1
Peptide/nickel transport system permease protein.
 0.762
Your Current Organism:
Friedmanniella sagamiharensis
NCBI taxonomy Id: 546874
Other names: DSM 21743, F. sagamiharensis, Friedmanniella sagamiharensis Iwai et al. 2010, Friedmanniella sp. FB2, NBRC 104965, strain FB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.