Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDU80551.1 | SDU81442.1 | SAMN04488544_0208 | SAMN04488544_0395 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Histidine kinase. | 0.807 |
SDU80819.1 | SDU81442.1 | SAMN04488544_0264 | SAMN04488544_0395 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Histidine kinase. | 0.867 |
SDU80819.1 | SDU86201.1 | SAMN04488544_0264 | SAMN04488544_1117 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.651 |
SDU81438.1 | SDU81442.1 | SAMN04488544_0394 | SAMN04488544_0395 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Histidine kinase. | 0.974 |
SDU81438.1 | SDU81448.1 | SAMN04488544_0394 | SAMN04488544_0396 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | CAAX protease self-immunity. | 0.808 |
SDU81438.1 | SDU89570.1 | SAMN04488544_0394 | SAMN04488544_1596 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.764 |
SDU81442.1 | SDU80551.1 | SAMN04488544_0395 | SAMN04488544_0208 | Histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.807 |
SDU81442.1 | SDU80819.1 | SAMN04488544_0395 | SAMN04488544_0264 | Histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.867 |
SDU81442.1 | SDU81438.1 | SAMN04488544_0395 | SAMN04488544_0394 | Histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.974 |
SDU81442.1 | SDU81448.1 | SAMN04488544_0395 | SAMN04488544_0396 | Histidine kinase. | CAAX protease self-immunity. | 0.849 |
SDU81442.1 | SDU86201.1 | SAMN04488544_0395 | SAMN04488544_1117 | Histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.848 |
SDU81442.1 | SDU89570.1 | SAMN04488544_0395 | SAMN04488544_1596 | Histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.843 |
SDU81442.1 | SDU92181.1 | SAMN04488544_0395 | SAMN04488544_2009 | Histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.863 |
SDU81442.1 | SDU93280.1 | SAMN04488544_0395 | SAMN04488544_2181 | Histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.877 |
SDU81442.1 | SDU95300.1 | SAMN04488544_0395 | SAMN04488544_2496 | Histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.877 |
SDU81442.1 | SDV02063.1 | SAMN04488544_0395 | SAMN04488544_3579 | Histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.872 |
SDU81448.1 | SDU81438.1 | SAMN04488544_0396 | SAMN04488544_0394 | CAAX protease self-immunity. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.808 |
SDU81448.1 | SDU81442.1 | SAMN04488544_0396 | SAMN04488544_0395 | CAAX protease self-immunity. | Histidine kinase. | 0.849 |
SDU86201.1 | SDU80819.1 | SAMN04488544_1117 | SAMN04488544_0264 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.651 |
SDU86201.1 | SDU81442.1 | SAMN04488544_1117 | SAMN04488544_0395 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Histidine kinase. | 0.848 |
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