Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDU81958.1 | SDU81965.1 | SAMN04488544_0471 | SAMN04488544_0472 | Cyclic nucleotide-binding protein. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.563 |
SDU81958.1 | SDU81973.1 | SAMN04488544_0471 | SAMN04488544_0473 | Cyclic nucleotide-binding protein. | NADPH:quinone reductase. | 0.423 |
SDU81958.1 | SDU81982.1 | SAMN04488544_0471 | SAMN04488544_0474 | Cyclic nucleotide-binding protein. | DNA-binding transcriptional regulator, AcrR family. | 0.423 |
SDU81958.1 | SDU81998.1 | SAMN04488544_0471 | SAMN04488544_0476 | Cyclic nucleotide-binding protein. | L-asparagine permease. | 0.440 |
SDU81965.1 | SDU81958.1 | SAMN04488544_0472 | SAMN04488544_0471 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Cyclic nucleotide-binding protein. | 0.563 |
SDU81965.1 | SDU81973.1 | SAMN04488544_0472 | SAMN04488544_0473 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | NADPH:quinone reductase. | 0.565 |
SDU81965.1 | SDU81982.1 | SAMN04488544_0472 | SAMN04488544_0474 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | DNA-binding transcriptional regulator, AcrR family. | 0.616 |
SDU81973.1 | SDU81958.1 | SAMN04488544_0473 | SAMN04488544_0471 | NADPH:quinone reductase. | Cyclic nucleotide-binding protein. | 0.423 |
SDU81973.1 | SDU81965.1 | SAMN04488544_0473 | SAMN04488544_0472 | NADPH:quinone reductase. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.565 |
SDU81973.1 | SDU81982.1 | SAMN04488544_0473 | SAMN04488544_0474 | NADPH:quinone reductase. | DNA-binding transcriptional regulator, AcrR family. | 0.773 |
SDU81973.1 | SDU81988.1 | SAMN04488544_0473 | SAMN04488544_0475 | NADPH:quinone reductase. | Amino acid ABC transporter substrate-binding protein, PAAT family. | 0.497 |
SDU81973.1 | SDU81998.1 | SAMN04488544_0473 | SAMN04488544_0476 | NADPH:quinone reductase. | L-asparagine permease. | 0.427 |
SDU81982.1 | SDU81958.1 | SAMN04488544_0474 | SAMN04488544_0471 | DNA-binding transcriptional regulator, AcrR family. | Cyclic nucleotide-binding protein. | 0.423 |
SDU81982.1 | SDU81965.1 | SAMN04488544_0474 | SAMN04488544_0472 | DNA-binding transcriptional regulator, AcrR family. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.616 |
SDU81982.1 | SDU81973.1 | SAMN04488544_0474 | SAMN04488544_0473 | DNA-binding transcriptional regulator, AcrR family. | NADPH:quinone reductase. | 0.773 |
SDU81982.1 | SDU81988.1 | SAMN04488544_0474 | SAMN04488544_0475 | DNA-binding transcriptional regulator, AcrR family. | Amino acid ABC transporter substrate-binding protein, PAAT family. | 0.543 |
SDU81982.1 | SDU81998.1 | SAMN04488544_0474 | SAMN04488544_0476 | DNA-binding transcriptional regulator, AcrR family. | L-asparagine permease. | 0.427 |
SDU81982.1 | SDU98515.1 | SAMN04488544_0474 | SAMN04488544_3008 | DNA-binding transcriptional regulator, AcrR family. | Protein of unknown function. | 0.460 |
SDU81988.1 | SDU81973.1 | SAMN04488544_0475 | SAMN04488544_0473 | Amino acid ABC transporter substrate-binding protein, PAAT family. | NADPH:quinone reductase. | 0.497 |
SDU81988.1 | SDU81982.1 | SAMN04488544_0475 | SAMN04488544_0474 | Amino acid ABC transporter substrate-binding protein, PAAT family. | DNA-binding transcriptional regulator, AcrR family. | 0.543 |
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