Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDU82469.1 | SDU82478.1 | SAMN04488544_0538 | SAMN04488544_0539 | Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | Predicted arabinose efflux permease, MFS family; Manually curated. | 0.734 |
SDU82469.1 | SDU82485.1 | SAMN04488544_0538 | SAMN04488544_0540 | Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | DNA-binding transcriptional regulator, MarR family. | 0.575 |
SDU82469.1 | SDU82494.1 | SAMN04488544_0538 | SAMN04488544_0541 | Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | Hypothetical protein. | 0.575 |
SDU82469.1 | SDU82501.1 | SAMN04488544_0538 | SAMN04488544_0542 | Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | Putative cyclase. | 0.473 |
SDU82469.1 | SDU82509.1 | SAMN04488544_0538 | SAMN04488544_0543 | Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | ABC-type glycerol-3-phosphate transport system, substrate-binding protein. | 0.473 |
SDU82478.1 | SDU82469.1 | SAMN04488544_0539 | SAMN04488544_0538 | Predicted arabinose efflux permease, MFS family; Manually curated. | Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | 0.734 |
SDU82478.1 | SDU82485.1 | SAMN04488544_0539 | SAMN04488544_0540 | Predicted arabinose efflux permease, MFS family; Manually curated. | DNA-binding transcriptional regulator, MarR family. | 0.620 |
SDU82478.1 | SDU82494.1 | SAMN04488544_0539 | SAMN04488544_0541 | Predicted arabinose efflux permease, MFS family; Manually curated. | Hypothetical protein. | 0.620 |
SDU82478.1 | SDU82501.1 | SAMN04488544_0539 | SAMN04488544_0542 | Predicted arabinose efflux permease, MFS family; Manually curated. | Putative cyclase. | 0.511 |
SDU82478.1 | SDU82509.1 | SAMN04488544_0539 | SAMN04488544_0543 | Predicted arabinose efflux permease, MFS family; Manually curated. | ABC-type glycerol-3-phosphate transport system, substrate-binding protein. | 0.508 |
SDU82485.1 | SDU82469.1 | SAMN04488544_0540 | SAMN04488544_0538 | DNA-binding transcriptional regulator, MarR family. | Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | 0.575 |
SDU82485.1 | SDU82478.1 | SAMN04488544_0540 | SAMN04488544_0539 | DNA-binding transcriptional regulator, MarR family. | Predicted arabinose efflux permease, MFS family; Manually curated. | 0.620 |
SDU82485.1 | SDU82494.1 | SAMN04488544_0540 | SAMN04488544_0541 | DNA-binding transcriptional regulator, MarR family. | Hypothetical protein. | 0.773 |
SDU82485.1 | SDU82501.1 | SAMN04488544_0540 | SAMN04488544_0542 | DNA-binding transcriptional regulator, MarR family. | Putative cyclase. | 0.625 |
SDU82485.1 | SDU82509.1 | SAMN04488544_0540 | SAMN04488544_0543 | DNA-binding transcriptional regulator, MarR family. | ABC-type glycerol-3-phosphate transport system, substrate-binding protein. | 0.625 |
SDU82494.1 | SDU82469.1 | SAMN04488544_0541 | SAMN04488544_0538 | Hypothetical protein. | Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | 0.575 |
SDU82494.1 | SDU82478.1 | SAMN04488544_0541 | SAMN04488544_0539 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family; Manually curated. | 0.620 |
SDU82494.1 | SDU82485.1 | SAMN04488544_0541 | SAMN04488544_0540 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.773 |
SDU82494.1 | SDU82501.1 | SAMN04488544_0541 | SAMN04488544_0542 | Hypothetical protein. | Putative cyclase. | 0.625 |
SDU82494.1 | SDU82509.1 | SAMN04488544_0541 | SAMN04488544_0543 | Hypothetical protein. | ABC-type glycerol-3-phosphate transport system, substrate-binding protein. | 0.625 |
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