STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU83965.1L-rhamnose mutarotase. (113 aa)    
Predicted Functional Partners:
SDU83926.1
L-rhamnose isomerase / sugar isomerase.
 
  
 0.978
SDU83938.1
Rhamnulokinase.
 
  
 0.972
SDU83932.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
  
 0.953
SDU83950.1
L-lactate dehydrogenase complex protein LldF.
       0.842
SDU83957.1
L-lactate dehydrogenase complex protein LldG.
       0.842
SDU83945.1
L-lactate dehydrogenase complex protein LldE.
  
    0.799
SDV03831.1
Fucose permease.
  
  
 0.776
SDU81679.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
   
    0.721
SDV00619.1
Protein of unknown function.
  
    0.619
SDU91692.1
L-fuconolactonase.
 
  
 0.583
Your Current Organism:
Friedmanniella sagamiharensis
NCBI taxonomy Id: 546874
Other names: DSM 21743, F. sagamiharensis, Friedmanniella sagamiharensis Iwai et al. 2010, Friedmanniella sp. FB2, NBRC 104965, strain FB2
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