Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDU80784.1 | SDU80838.1 | SAMN04488544_0257 | SAMN04488544_0268 | Uridine kinase. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.535 |
SDU80784.1 | SDU84176.1 | SAMN04488544_0257 | SAMN04488544_0799 | Uridine kinase. | Hypothetical protein. | 0.425 |
SDU80838.1 | SDU80784.1 | SAMN04488544_0268 | SAMN04488544_0257 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Uridine kinase. | 0.535 |
SDU80838.1 | SDU84176.1 | SAMN04488544_0268 | SAMN04488544_0799 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Hypothetical protein. | 0.402 |
SDU80838.1 | apt | SAMN04488544_0268 | SAMN04488544_1518 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.960 |
SDU84176.1 | SDU80784.1 | SAMN04488544_0799 | SAMN04488544_0257 | Hypothetical protein. | Uridine kinase. | 0.425 |
SDU84176.1 | SDU80838.1 | SAMN04488544_0799 | SAMN04488544_0268 | Hypothetical protein. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.402 |
SDU84176.1 | SDU84183.1 | SAMN04488544_0799 | SAMN04488544_0800 | Hypothetical protein. | Predicted oxidoreductase. | 0.554 |
SDU84176.1 | SDU89272.1 | SAMN04488544_0799 | SAMN04488544_1552 | Hypothetical protein. | Glutamate synthase (NADH) large subunit. | 0.492 |
SDU84176.1 | SDU95378.1 | SAMN04488544_0799 | SAMN04488544_2508 | Hypothetical protein. | Ribonuclease T1. | 0.405 |
SDU84176.1 | SDU96365.1 | SAMN04488544_0799 | SAMN04488544_2663 | Hypothetical protein. | RNB domain-containing protein. | 0.424 |
SDU84176.1 | SDU97836.1 | SAMN04488544_0799 | SAMN04488544_2898 | Hypothetical protein. | Hypothetical protein. | 0.517 |
SDU84176.1 | SDU99013.1 | SAMN04488544_0799 | SAMN04488544_3092 | Hypothetical protein. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.401 |
SDU84176.1 | apt | SAMN04488544_0799 | SAMN04488544_1518 | Hypothetical protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.413 |
SDU84183.1 | SDU84176.1 | SAMN04488544_0800 | SAMN04488544_0799 | Predicted oxidoreductase. | Hypothetical protein. | 0.554 |
SDU89272.1 | SDU84176.1 | SAMN04488544_1552 | SAMN04488544_0799 | Glutamate synthase (NADH) large subunit. | Hypothetical protein. | 0.492 |
SDU89272.1 | SDU97836.1 | SAMN04488544_1552 | SAMN04488544_2898 | Glutamate synthase (NADH) large subunit. | Hypothetical protein. | 0.700 |
SDU89272.1 | SDU99013.1 | SAMN04488544_1552 | SAMN04488544_3092 | Glutamate synthase (NADH) large subunit. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.685 |
SDU89272.1 | apt | SAMN04488544_1552 | SAMN04488544_1518 | Glutamate synthase (NADH) large subunit. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.488 |
SDU95378.1 | SDU84176.1 | SAMN04488544_2508 | SAMN04488544_0799 | Ribonuclease T1. | Hypothetical protein. | 0.405 |
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