Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDU79696.1 | SDU86806.1 | SAMN04488544_0027 | SAMN04488544_1202 | Amylosucrase. | Amino acid transporter. | 0.538 |
SDU79696.1 | SDU87711.1 | SAMN04488544_0027 | SAMN04488544_1328 | Amylosucrase. | Alpha-glucosidase. | 0.540 |
SDU79696.1 | SDU90111.1 | SAMN04488544_0027 | SAMN04488544_1682 | Amylosucrase. | Alpha-amylase. | 0.552 |
SDU79696.1 | SDU97386.1 | SAMN04488544_0027 | SAMN04488544_2827 | Amylosucrase. | Alpha-glucosidase. | 0.542 |
SDU86769.1 | SDU86791.1 | SAMN04488544_1197 | SAMN04488544_1200 | Hypothetical protein. | Trk system potassium uptake protein TrkA. | 0.734 |
SDU86769.1 | SDU86799.1 | SAMN04488544_1197 | SAMN04488544_1201 | Hypothetical protein. | Trk system potassium uptake protein TrkA. | 0.704 |
SDU86769.1 | SDU86806.1 | SAMN04488544_1197 | SAMN04488544_1202 | Hypothetical protein. | Amino acid transporter. | 0.841 |
SDU86791.1 | SDU86769.1 | SAMN04488544_1200 | SAMN04488544_1197 | Trk system potassium uptake protein TrkA. | Hypothetical protein. | 0.734 |
SDU86791.1 | SDU86799.1 | SAMN04488544_1200 | SAMN04488544_1201 | Trk system potassium uptake protein TrkA. | Trk system potassium uptake protein TrkA. | 0.971 |
SDU86791.1 | SDU86806.1 | SAMN04488544_1200 | SAMN04488544_1202 | Trk system potassium uptake protein TrkA. | Amino acid transporter. | 0.897 |
SDU86791.1 | SDU86812.1 | SAMN04488544_1200 | SAMN04488544_1203 | Trk system potassium uptake protein TrkA. | tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.554 |
SDU86791.1 | nadE | SAMN04488544_1200 | SAMN04488544_2640 | Trk system potassium uptake protein TrkA. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.598 |
SDU86799.1 | SDU86769.1 | SAMN04488544_1201 | SAMN04488544_1197 | Trk system potassium uptake protein TrkA. | Hypothetical protein. | 0.704 |
SDU86799.1 | SDU86791.1 | SAMN04488544_1201 | SAMN04488544_1200 | Trk system potassium uptake protein TrkA. | Trk system potassium uptake protein TrkA. | 0.971 |
SDU86799.1 | SDU86806.1 | SAMN04488544_1201 | SAMN04488544_1202 | Trk system potassium uptake protein TrkA. | Amino acid transporter. | 0.891 |
SDU86799.1 | SDU86812.1 | SAMN04488544_1201 | SAMN04488544_1203 | Trk system potassium uptake protein TrkA. | tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.554 |
SDU86799.1 | nadE | SAMN04488544_1201 | SAMN04488544_2640 | Trk system potassium uptake protein TrkA. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.598 |
SDU86806.1 | SDU79696.1 | SAMN04488544_1202 | SAMN04488544_0027 | Amino acid transporter. | Amylosucrase. | 0.538 |
SDU86806.1 | SDU86769.1 | SAMN04488544_1202 | SAMN04488544_1197 | Amino acid transporter. | Hypothetical protein. | 0.841 |
SDU86806.1 | SDU86791.1 | SAMN04488544_1202 | SAMN04488544_1200 | Amino acid transporter. | Trk system potassium uptake protein TrkA. | 0.897 |
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