Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDU86735.1 | SDU87488.1 | SAMN04488544_1193 | SAMN04488544_1298 | Protein of unknown function. | MerR HTH family regulatory protein. | 0.772 |
| SDU86735.1 | rbpA | SAMN04488544_1193 | SAMN04488544_0649 | Protein of unknown function. | RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. | 0.774 |
| SDU86735.1 | rpoZ | SAMN04488544_1193 | SAMN04488544_1477 | Protein of unknown function. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.703 |
| SDU86735.1 | whiB | SAMN04488544_1193 | SAMN04488544_0458 | Protein of unknown function. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.527 |
| SDU86735.1 | whiB-2 | SAMN04488544_1193 | SAMN04488544_1461 | Protein of unknown function. | WhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.458 |
| SDU86735.1 | whiB-3 | SAMN04488544_1193 | SAMN04488544_1681 | Protein of unknown function. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.656 |
| SDU86735.1 | whiB-5 | SAMN04488544_1193 | SAMN04488544_1961 | Protein of unknown function. | WhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.412 |
| SDU87471.1 | SDU87480.1 | SAMN04488544_1296 | SAMN04488544_1297 | MerR family regulatory protein. | Hypothetical protein. | 0.875 |
| SDU87471.1 | SDU87488.1 | SAMN04488544_1296 | SAMN04488544_1298 | MerR family regulatory protein. | MerR HTH family regulatory protein. | 0.784 |
| SDU87471.1 | SDV02141.1 | SAMN04488544_1296 | SAMN04488544_3590 | MerR family regulatory protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.782 |
| SDU87471.1 | rpoZ | SAMN04488544_1296 | SAMN04488544_1477 | MerR family regulatory protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.707 |
| SDU87480.1 | SDU87471.1 | SAMN04488544_1297 | SAMN04488544_1296 | Hypothetical protein. | MerR family regulatory protein. | 0.875 |
| SDU87480.1 | SDU87488.1 | SAMN04488544_1297 | SAMN04488544_1298 | Hypothetical protein. | MerR HTH family regulatory protein. | 0.881 |
| SDU87488.1 | SDU86735.1 | SAMN04488544_1298 | SAMN04488544_1193 | MerR HTH family regulatory protein. | Protein of unknown function. | 0.772 |
| SDU87488.1 | SDU87471.1 | SAMN04488544_1298 | SAMN04488544_1296 | MerR HTH family regulatory protein. | MerR family regulatory protein. | 0.784 |
| SDU87488.1 | SDU87480.1 | SAMN04488544_1298 | SAMN04488544_1297 | MerR HTH family regulatory protein. | Hypothetical protein. | 0.881 |
| SDU87488.1 | SDV02141.1 | SAMN04488544_1298 | SAMN04488544_3590 | MerR HTH family regulatory protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.782 |
| SDU87488.1 | rbpA | SAMN04488544_1298 | SAMN04488544_0649 | MerR HTH family regulatory protein. | RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. | 0.762 |
| SDU87488.1 | rpoZ | SAMN04488544_1298 | SAMN04488544_1477 | MerR HTH family regulatory protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.884 |
| SDU87488.1 | whiB | SAMN04488544_1298 | SAMN04488544_0458 | MerR HTH family regulatory protein. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.845 |
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