Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDU89975.1 | SDU89982.1 | SAMN04488544_1661 | SAMN04488544_1662 | DNA-binding transcriptional regulator, ArsR family. | Cation efflux family protein. | 0.909 |
SDU89975.1 | SDU89986.1 | SAMN04488544_1661 | SAMN04488544_1663 | DNA-binding transcriptional regulator, ArsR family. | Aldo/keto reductase family protein. | 0.578 |
SDU89975.1 | SDU89994.1 | SAMN04488544_1661 | SAMN04488544_1664 | DNA-binding transcriptional regulator, ArsR family. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.423 |
SDU89982.1 | SDU89975.1 | SAMN04488544_1662 | SAMN04488544_1661 | Cation efflux family protein. | DNA-binding transcriptional regulator, ArsR family. | 0.909 |
SDU89982.1 | SDU89986.1 | SAMN04488544_1662 | SAMN04488544_1663 | Cation efflux family protein. | Aldo/keto reductase family protein. | 0.578 |
SDU89982.1 | SDU89994.1 | SAMN04488544_1662 | SAMN04488544_1664 | Cation efflux family protein. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.428 |
SDU89982.1 | SDU92732.1 | SAMN04488544_1662 | SAMN04488544_2094 | Cation efflux family protein. | Cobalt-zinc-cadmium efflux system protein. | 0.437 |
SDU89982.1 | mdh | SAMN04488544_1662 | SAMN04488544_0230 | Cation efflux family protein. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.687 |
SDU89986.1 | SDU89975.1 | SAMN04488544_1663 | SAMN04488544_1661 | Aldo/keto reductase family protein. | DNA-binding transcriptional regulator, ArsR family. | 0.578 |
SDU89986.1 | SDU89982.1 | SAMN04488544_1663 | SAMN04488544_1662 | Aldo/keto reductase family protein. | Cation efflux family protein. | 0.578 |
SDU89986.1 | SDU89994.1 | SAMN04488544_1663 | SAMN04488544_1664 | Aldo/keto reductase family protein. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.551 |
SDU89994.1 | SDU89975.1 | SAMN04488544_1664 | SAMN04488544_1661 | DNA-binding transcriptional regulator, LacI/PurR family. | DNA-binding transcriptional regulator, ArsR family. | 0.423 |
SDU89994.1 | SDU89982.1 | SAMN04488544_1664 | SAMN04488544_1662 | DNA-binding transcriptional regulator, LacI/PurR family. | Cation efflux family protein. | 0.428 |
SDU89994.1 | SDU89986.1 | SAMN04488544_1664 | SAMN04488544_1663 | DNA-binding transcriptional regulator, LacI/PurR family. | Aldo/keto reductase family protein. | 0.551 |
SDU92732.1 | SDU89982.1 | SAMN04488544_2094 | SAMN04488544_1662 | Cobalt-zinc-cadmium efflux system protein. | Cation efflux family protein. | 0.437 |
mdh | SDU89982.1 | SAMN04488544_0230 | SAMN04488544_1662 | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | Cation efflux family protein. | 0.687 |