STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU91575.1Hypothetical protein. (384 aa)    
Predicted Functional Partners:
SDU80502.1
Uncharacterized membrane protein YoaK, UPF0700 family.
  
     0.485
SDU91568.1
beta-N-acetylhexosaminidase.
       0.485
SDU86559.1
Sugar phosphate isomerase/epimerase.
  
     0.479
SDU97543.1
Protein of unknown function.
  
     0.468
SDV02106.1
Hypothetical protein.
  
     0.467
SDU92394.1
Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family.
  
     0.464
SDV04702.1
Hypothetical protein.
  
     0.461
SDU91535.1
Hypothetical protein.
    
  0.441
SDV00023.1
Trehalose synthase.
  
    0.436
SDV01435.1
Hypothetical protein.
  
     0.403
Your Current Organism:
Friedmanniella sagamiharensis
NCBI taxonomy Id: 546874
Other names: DSM 21743, F. sagamiharensis, Friedmanniella sagamiharensis Iwai et al. 2010, Friedmanniella sp. FB2, NBRC 104965, strain FB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.