STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU92366.1Protein of unknown function DUF58. (359 aa)    
Predicted Functional Partners:
SDU92353.1
Ca-activated chloride channel family protein.
 
    0.971
SDU92360.1
Ca-activated chloride channel family protein.
 
    0.971
SDU92371.1
MoxR-like ATPase.
  
 0.953
SDU98667.1
Ca-activated chloride channel family protein.
 
    0.869
SDU98672.1
Ca-activated chloride channel family protein.
 
     0.780
SDU92377.1
Hypothetical protein.
 
     0.765
SDU98684.1
MoxR-like ATPase.
  
 0.757
SDV03262.1
Putative tRNA adenosine deaminase-associated protein.
  
     0.709
SDU98365.1
Hypothetical protein.
  
     0.661
SDU96829.1
Hypothetical protein.
  
     0.605
Your Current Organism:
Friedmanniella sagamiharensis
NCBI taxonomy Id: 546874
Other names: DSM 21743, F. sagamiharensis, Friedmanniella sagamiharensis Iwai et al. 2010, Friedmanniella sp. FB2, NBRC 104965, strain FB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.