STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU94692.13-oxoacyl-[acyl-carrier protein] reductase. (244 aa)    
Predicted Functional Partners:
SDV04906.1
Short-chain dehydrogenase.
  
     0.772
SDU94686.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
  0.769
SDU92067.1
[acyl-carrier-protein] S-malonyltransferase.
  
 0.756
SDU89272.1
Glutamate synthase (NADH) large subunit.
     
 0.747
SDU87253.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
  
    0.693
SDU93575.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
     0.686
SDU92086.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 0.659
SDU94698.1
cation:H+ antiporter.
       0.554
SDU86863.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.539
SDV04447.1
3',5'-cyclic AMP phosphodiesterase CpdA.
    
   0.499
Your Current Organism:
Friedmanniella sagamiharensis
NCBI taxonomy Id: 546874
Other names: DSM 21743, F. sagamiharensis, Friedmanniella sagamiharensis Iwai et al. 2010, Friedmanniella sp. FB2, NBRC 104965, strain FB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.