STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU95931.1tRNA 2-thiouridine synthesizing protein A; Belongs to the sulfur carrier protein TusA family. (76 aa)    
Predicted Functional Partners:
SDU95924.1
Cysteine desulfurase; Manually curated.
 
 
 0.995
SDU89460.1
Cysteine desulfurase.
   
 0.971
SDU90831.1
Adenylyltransferase and sulfurtransferase.
  
 
 0.863
SDV05050.1
Predicted peroxiredoxin.
 
  
 0.763
SDU95905.1
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
       0.645
SDU95918.1
Cytochrome c oxidase subunit 2.
       0.645
SDU81421.1
Formate dehydrogenase major subunit.
    
 0.553
SDU95912.1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
       0.547
SDU98832.1
NADH dehydrogenase.
    
 0.527
SDU96557.1
NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
    
 0.522
Your Current Organism:
Friedmanniella sagamiharensis
NCBI taxonomy Id: 546874
Other names: DSM 21743, F. sagamiharensis, Friedmanniella sagamiharensis Iwai et al. 2010, Friedmanniella sp. FB2, NBRC 104965, strain FB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.