STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU99398.1Zinc/manganese transport system ATP-binding protein. (294 aa)    
Predicted Functional Partners:
SDU99392.1
Zinc/manganese transport system substrate-binding protein.
 
  
  0.984
SDU99405.1
Zinc/manganese transport system permease protein.
 
  
  0.980
SDU99412.1
Zinc uptake regulator, Fur family; Belongs to the Fur family.
       0.805
SDU99385.1
Hypothetical protein.
    
  0.796
SDU90333.1
Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
    
  0.727
SDU90340.1
Manganese/iron transport system permease protein.
 
  
  0.696
SDU80072.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
   
  0.654
SDU81035.1
Multiple sugar transport system permease protein.
   
  0.654
SDU81060.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
   
  0.654
SDU82122.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
   
  0.654
Your Current Organism:
Friedmanniella sagamiharensis
NCBI taxonomy Id: 546874
Other names: DSM 21743, F. sagamiharensis, Friedmanniella sagamiharensis Iwai et al. 2010, Friedmanniella sp. FB2, NBRC 104965, strain FB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.