Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDU99690.1 | SDU99697.1 | SAMN04488544_3199 | SAMN04488544_3200 | Endonuclease-8; Belongs to the FPG family. | Hypothetical protein. | 0.648 |
SDU99690.1 | SDU99704.1 | SAMN04488544_3199 | SAMN04488544_3201 | Endonuclease-8; Belongs to the FPG family. | DNA-3-methyladenine glycosylase II. | 0.651 |
SDU99690.1 | SDU99710.1 | SAMN04488544_3199 | SAMN04488544_3202 | Endonuclease-8; Belongs to the FPG family. | Protein SanA, affects membrane permeability for vancomycin. | 0.459 |
SDU99697.1 | SDU99690.1 | SAMN04488544_3200 | SAMN04488544_3199 | Hypothetical protein. | Endonuclease-8; Belongs to the FPG family. | 0.648 |
SDU99697.1 | SDU99704.1 | SAMN04488544_3200 | SAMN04488544_3201 | Hypothetical protein. | DNA-3-methyladenine glycosylase II. | 0.773 |
SDU99697.1 | SDU99710.1 | SAMN04488544_3200 | SAMN04488544_3202 | Hypothetical protein. | Protein SanA, affects membrane permeability for vancomycin. | 0.529 |
SDU99704.1 | SDU99690.1 | SAMN04488544_3201 | SAMN04488544_3199 | DNA-3-methyladenine glycosylase II. | Endonuclease-8; Belongs to the FPG family. | 0.651 |
SDU99704.1 | SDU99697.1 | SAMN04488544_3201 | SAMN04488544_3200 | DNA-3-methyladenine glycosylase II. | Hypothetical protein. | 0.773 |
SDU99704.1 | SDU99710.1 | SAMN04488544_3201 | SAMN04488544_3202 | DNA-3-methyladenine glycosylase II. | Protein SanA, affects membrane permeability for vancomycin. | 0.529 |
SDU99704.1 | SDU99717.1 | SAMN04488544_3201 | SAMN04488544_3203 | DNA-3-methyladenine glycosylase II. | Hypothetical protein. | 0.471 |
SDU99710.1 | SDU99690.1 | SAMN04488544_3202 | SAMN04488544_3199 | Protein SanA, affects membrane permeability for vancomycin. | Endonuclease-8; Belongs to the FPG family. | 0.459 |
SDU99710.1 | SDU99697.1 | SAMN04488544_3202 | SAMN04488544_3200 | Protein SanA, affects membrane permeability for vancomycin. | Hypothetical protein. | 0.529 |
SDU99710.1 | SDU99704.1 | SAMN04488544_3202 | SAMN04488544_3201 | Protein SanA, affects membrane permeability for vancomycin. | DNA-3-methyladenine glycosylase II. | 0.529 |
SDU99710.1 | SDU99717.1 | SAMN04488544_3202 | SAMN04488544_3203 | Protein SanA, affects membrane permeability for vancomycin. | Hypothetical protein. | 0.531 |
SDU99710.1 | topA | SAMN04488544_3202 | SAMN04488544_3895 | Protein SanA, affects membrane permeability for vancomycin. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.483 |
SDU99717.1 | SDU99704.1 | SAMN04488544_3203 | SAMN04488544_3201 | Hypothetical protein. | DNA-3-methyladenine glycosylase II. | 0.471 |
SDU99717.1 | SDU99710.1 | SAMN04488544_3203 | SAMN04488544_3202 | Hypothetical protein. | Protein SanA, affects membrane permeability for vancomycin. | 0.531 |
topA | SDU99710.1 | SAMN04488544_3895 | SAMN04488544_3202 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Protein SanA, affects membrane permeability for vancomycin. | 0.483 |