STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDV02186.1Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (338 aa)    
Predicted Functional Partners:
SDV02173.1
Iron complex transport system ATP-binding protein.
 
 0.999
SDU83539.1
Iron complex transport system substrate-binding protein.
 
 0.987
SDU99738.1
Iron complex transport system substrate-binding protein.
 
 0.987
SDV04788.1
Iron complex transport system substrate-binding protein.
 
 0.987
SDV02193.1
Iron complex transport system substrate-binding protein.
  
 0.981
SDV02180.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
0.980
SDV00353.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
  
  
 0.557
SDU95758.1
Urease subunit beta.
     
 0.553
SDU94666.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
    
  0.503
SDU91219.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.483
Your Current Organism:
Friedmanniella sagamiharensis
NCBI taxonomy Id: 546874
Other names: DSM 21743, F. sagamiharensis, Friedmanniella sagamiharensis Iwai et al. 2010, Friedmanniella sp. FB2, NBRC 104965, strain FB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.