Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDU80420.1 | SDU83621.1 | SAMN04488544_0181 | SAMN04488544_0714 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.441 |
SDU80420.1 | SDU85391.1 | SAMN04488544_0181 | SAMN04488544_0989 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.441 |
SDU80420.1 | SDV02330.1 | SAMN04488544_0181 | SAMN04488544_3620 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | Alanine racemase. | 0.678 |
SDU81918.1 | SDU85068.1 | SAMN04488544_0466 | SAMN04488544_0936 | Phospho-glucose isomerase C-terminal SIS domain-containing protein. | Flavin reductase like domain-containing protein. | 0.550 |
SDU81918.1 | SDU85625.1 | SAMN04488544_0466 | SAMN04488544_1026 | Phospho-glucose isomerase C-terminal SIS domain-containing protein. | Predicted O-methyltransferase YrrM. | 0.624 |
SDU81918.1 | SDU93500.1 | SAMN04488544_0466 | SAMN04488544_2215 | Phospho-glucose isomerase C-terminal SIS domain-containing protein. | Hypothetical protein. | 0.621 |
SDU81918.1 | SDU97346.1 | SAMN04488544_0466 | SAMN04488544_2821 | Phospho-glucose isomerase C-terminal SIS domain-containing protein. | Hypothetical protein. | 0.716 |
SDU81918.1 | SDV01398.1 | SAMN04488544_0466 | SAMN04488544_3472 | Phospho-glucose isomerase C-terminal SIS domain-containing protein. | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | 0.663 |
SDU81918.1 | SDV02330.1 | SAMN04488544_0466 | SAMN04488544_3620 | Phospho-glucose isomerase C-terminal SIS domain-containing protein. | Alanine racemase. | 0.658 |
SDU81918.1 | SDV02335.1 | SAMN04488544_0466 | SAMN04488544_3621 | Phospho-glucose isomerase C-terminal SIS domain-containing protein. | Lipid II:glycine glycyltransferase (Peptidoglycan interpeptide bridge formation enzyme). | 0.476 |
SDU83621.1 | SDU80420.1 | SAMN04488544_0714 | SAMN04488544_0181 | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.441 |
SDU83621.1 | SDV02330.1 | SAMN04488544_0714 | SAMN04488544_3620 | L-alanine dehydrogenase; Belongs to the AlaDH/PNT family. | Alanine racemase. | 0.782 |
SDU85068.1 | SDU81918.1 | SAMN04488544_0936 | SAMN04488544_0466 | Flavin reductase like domain-containing protein. | Phospho-glucose isomerase C-terminal SIS domain-containing protein. | 0.550 |
SDU85068.1 | SDU85625.1 | SAMN04488544_0936 | SAMN04488544_1026 | Flavin reductase like domain-containing protein. | Predicted O-methyltransferase YrrM. | 0.629 |
SDU85068.1 | SDV02330.1 | SAMN04488544_0936 | SAMN04488544_3620 | Flavin reductase like domain-containing protein. | Alanine racemase. | 0.646 |
SDU85068.1 | SDV02335.1 | SAMN04488544_0936 | SAMN04488544_3621 | Flavin reductase like domain-containing protein. | Lipid II:glycine glycyltransferase (Peptidoglycan interpeptide bridge formation enzyme). | 0.500 |
SDU85391.1 | SDU80420.1 | SAMN04488544_0989 | SAMN04488544_0181 | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.441 |
SDU85391.1 | SDV02330.1 | SAMN04488544_0989 | SAMN04488544_3620 | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | Alanine racemase. | 0.782 |
SDU85625.1 | SDU81918.1 | SAMN04488544_1026 | SAMN04488544_0466 | Predicted O-methyltransferase YrrM. | Phospho-glucose isomerase C-terminal SIS domain-containing protein. | 0.624 |
SDU85625.1 | SDU85068.1 | SAMN04488544_1026 | SAMN04488544_0936 | Predicted O-methyltransferase YrrM. | Flavin reductase like domain-containing protein. | 0.629 |
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