Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDU80915.1 | SDU89093.1 | SAMN04488544_0284 | SAMN04488544_1526 | Hypothetical protein. | Hypothetical protein. | 0.596 |
SDU80915.1 | SDV00581.1 | SAMN04488544_0284 | SAMN04488544_3340 | Hypothetical protein. | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family. | 0.462 |
SDU80915.1 | SDV04148.1 | SAMN04488544_0284 | SAMN04488544_3923 | Hypothetical protein. | Predicted lipoprotein. | 0.661 |
SDU89093.1 | SDU80915.1 | SAMN04488544_1526 | SAMN04488544_0284 | Hypothetical protein. | Hypothetical protein. | 0.596 |
SDU89093.1 | SDV00581.1 | SAMN04488544_1526 | SAMN04488544_3340 | Hypothetical protein. | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family. | 0.434 |
SDU89093.1 | SDV04148.1 | SAMN04488544_1526 | SAMN04488544_3923 | Hypothetical protein. | Predicted lipoprotein. | 0.628 |
SDV00581.1 | SDU80915.1 | SAMN04488544_3340 | SAMN04488544_0284 | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family. | Hypothetical protein. | 0.462 |
SDV00581.1 | SDU89093.1 | SAMN04488544_3340 | SAMN04488544_1526 | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family. | Hypothetical protein. | 0.434 |
SDV00581.1 | SDV04148.1 | SAMN04488544_3340 | SAMN04488544_3923 | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family. | Predicted lipoprotein. | 0.629 |
SDV04125.1 | SDV04130.1 | SAMN04488544_3919 | SAMN04488544_3920 | Homodimeric dihydroxyacetone kinase. | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | 0.638 |
SDV04125.1 | SDV04142.1 | SAMN04488544_3919 | SAMN04488544_3922 | Homodimeric dihydroxyacetone kinase. | Monosaccharide ABC transporter ATP-binding protein, CUT2 family. | 0.456 |
SDV04125.1 | SDV04148.1 | SAMN04488544_3919 | SAMN04488544_3923 | Homodimeric dihydroxyacetone kinase. | Predicted lipoprotein. | 0.640 |
SDV04125.1 | SDV04155.1 | SAMN04488544_3919 | SAMN04488544_3924 | Homodimeric dihydroxyacetone kinase. | Triosephosphate isomerase. | 0.733 |
SDV04125.1 | SDV04162.1 | SAMN04488544_3919 | SAMN04488544_3925 | Homodimeric dihydroxyacetone kinase. | Threonine dehydrogenase. | 0.760 |
SDV04125.1 | SDV04168.1 | SAMN04488544_3919 | SAMN04488544_3926 | Homodimeric dihydroxyacetone kinase. | DNA-binding transcriptional regulator LsrR, DeoR family. | 0.690 |
SDV04130.1 | SDV04125.1 | SAMN04488544_3920 | SAMN04488544_3919 | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | Homodimeric dihydroxyacetone kinase. | 0.638 |
SDV04130.1 | SDV04138.1 | SAMN04488544_3920 | SAMN04488544_3921 | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family. | 0.948 |
SDV04130.1 | SDV04142.1 | SAMN04488544_3920 | SAMN04488544_3922 | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | Monosaccharide ABC transporter ATP-binding protein, CUT2 family. | 0.938 |
SDV04130.1 | SDV04148.1 | SAMN04488544_3920 | SAMN04488544_3923 | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | Predicted lipoprotein. | 0.879 |
SDV04130.1 | SDV04155.1 | SAMN04488544_3920 | SAMN04488544_3924 | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | Triosephosphate isomerase. | 0.625 |
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