STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDV04409.1Glycosyltransferase, GT2 family. (315 aa)    
Predicted Functional Partners:
SDV04304.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.964
SDV04309.1
Glycosyltransferase, GT2 family.
 
  
  0.880
SDV04413.1
Coenzyme F420 hydrogenase subunit beta.
 
     0.848
SDV04419.1
Polysaccharide pyruvyl transferase family protein WcaK.
 
     0.840
SDV04314.1
Hypothetical protein.
 
    0.826
SDU86714.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.722
SDV04425.1
PKD domain-containing protein.
 
    0.693
SDV04459.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.637
SDU86700.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.616
SDV04360.1
Polysaccharide transporter, PST family; Manually curated.
 
  
 0.600
Your Current Organism:
Friedmanniella sagamiharensis
NCBI taxonomy Id: 546874
Other names: DSM 21743, F. sagamiharensis, Friedmanniella sagamiharensis Iwai et al. 2010, Friedmanniella sp. FB2, NBRC 104965, strain FB2
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