STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDV04788.1Iron complex transport system substrate-binding protein. (341 aa)    
Predicted Functional Partners:
SDV02173.1
Iron complex transport system ATP-binding protein.
 
 0.991
SDV02186.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.987
SDV02180.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.826
SDV04782.1
Hypothetical protein.
       0.549
SDU80688.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
 
  
 0.511
SDV04793.1
Porphobilinogen synthase; Belongs to the ALAD family.
     
 0.502
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
       0.483
SDV04804.1
Broad specificity phosphatase PhoE.
       0.483
SDV04810.1
Thiol-disulfide isomerase or thioredoxin.
       0.483
SDV04814.1
Cytochrome c-type biogenesis protein.
       0.483
Your Current Organism:
Friedmanniella sagamiharensis
NCBI taxonomy Id: 546874
Other names: DSM 21743, F. sagamiharensis, Friedmanniella sagamiharensis Iwai et al. 2010, Friedmanniella sp. FB2, NBRC 104965, strain FB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.