STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF74613.1Hypothetical protein. (243 aa)    
Predicted Functional Partners:
EEF74614.1
Flavin reductase domain family protein; KEGG: psb:Psyr_0995 0.00010 flavin reductase-like K00484.
       0.788
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
       0.744
EEF77042.1
Hypothetical protein.
  
     0.744
EEF74903.1
Hypothetical protein.
  
     0.721
EEF76462.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.717
EEF75224.1
Hypothetical protein.
  
     0.696
EEF77636.1
Hypothetical protein.
  
     0.693
EEF76167.1
LysM domain protein; KEGG: mpe:MYPE6470 0.0011 parC; DNA topoisomerase IV subunit A K02621.
  
     0.692
EEF76581.1
Prevent-host-death family protein.
  
     0.662
EEF75526.1
Hypothetical protein.
  
     0.649
Your Current Organism:
Bacteroides coprophilus
NCBI taxonomy Id: 547042
Other names: B. coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus CB42, Bacteroides coprophilus DSM 18228, Bacteroides coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus JCM 13818, Bacteroides coprophilus JCM 13818 = DSM 18228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.