STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF75290.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
EEF74933.1
Hypothetical protein.
  
     0.642
EEF74582.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.636
EEF75629.1
Hypothetical protein.
  
     0.623
EEF74882.1
Hypothetical protein; KEGG: bpm:BURPS1710b_2406 0.0053 bcp; antioxidant, AhpC/Tsa family K03564.
  
     0.590
EEF75517.1
Hypothetical protein; KEGG: chu:CHU_3268 1.0e-32 peptidyl-prolyl cis-trans isomerase K01802.
  
     0.574
lipB
Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
       0.566
EEF75295.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.565
EEF77998.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.545
EEF75113.1
Tat pathway signal sequence domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.542
EEF75294.1
KEGG: fal:FRAAL5379 1.2e-18 ABC transporter ATP-binding protein K06020; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.538
Your Current Organism:
Bacteroides coprophilus
NCBI taxonomy Id: 547042
Other names: B. coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus CB42, Bacteroides coprophilus DSM 18228, Bacteroides coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus JCM 13818, Bacteroides coprophilus JCM 13818 = DSM 18228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.