Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEF75495.1 | EEF75496.1 | BACCOPRO_00984 | BACCOPRO_00985 | TIGR02453 family protein; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein. | 0.540 |
EEF75495.1 | EEF75497.1 | BACCOPRO_00984 | BACCOPRO_00986 | TIGR02453 family protein; Psort location: Cytoplasmic, score: 8.96. | Glycosyl hydrolase family 3 C-terminal domain protein; KEGG: psb:Psyr_3993 4.5e-45 glycoside hydrolase, family 3, N-terminal:glycoside hydrolase, family 3, C-terminal K05349; Psort location: Periplasmic, score: 9.44. | 0.415 |
EEF75496.1 | EEF75495.1 | BACCOPRO_00985 | BACCOPRO_00984 | Hypothetical protein. | TIGR02453 family protein; Psort location: Cytoplasmic, score: 8.96. | 0.540 |
EEF75496.1 | EEF75497.1 | BACCOPRO_00985 | BACCOPRO_00986 | Hypothetical protein. | Glycosyl hydrolase family 3 C-terminal domain protein; KEGG: psb:Psyr_3993 4.5e-45 glycoside hydrolase, family 3, N-terminal:glycoside hydrolase, family 3, C-terminal K05349; Psort location: Periplasmic, score: 9.44. | 0.576 |
EEF75497.1 | EEF75495.1 | BACCOPRO_00986 | BACCOPRO_00984 | Glycosyl hydrolase family 3 C-terminal domain protein; KEGG: psb:Psyr_3993 4.5e-45 glycoside hydrolase, family 3, N-terminal:glycoside hydrolase, family 3, C-terminal K05349; Psort location: Periplasmic, score: 9.44. | TIGR02453 family protein; Psort location: Cytoplasmic, score: 8.96. | 0.415 |
EEF75497.1 | EEF75496.1 | BACCOPRO_00986 | BACCOPRO_00985 | Glycosyl hydrolase family 3 C-terminal domain protein; KEGG: psb:Psyr_3993 4.5e-45 glycoside hydrolase, family 3, N-terminal:glycoside hydrolase, family 3, C-terminal K05349; Psort location: Periplasmic, score: 9.44. | Hypothetical protein. | 0.576 |