STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF76564.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (147 aa)    
Predicted Functional Partners:
EEF76563.1
Hypothetical protein.
       0.785
EEF76562.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.605
EEF76561.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.601
EEF76560.1
Hypothetical protein; KEGG: cdi:DIP2203 0.0042 glf; UDP-galactopyranose mutase K01854.
       0.589
EEF76559.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.577
Your Current Organism:
Bacteroides coprophilus
NCBI taxonomy Id: 547042
Other names: B. coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus CB42, Bacteroides coprophilus DSM 18228, Bacteroides coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus JCM 13818, Bacteroides coprophilus JCM 13818 = DSM 18228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.