STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF76612.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
EEF76610.1
Hypothetical protein.
       0.785
EEF76611.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.784
EEF76613.1
Hypothetical protein.
       0.757
EEF76609.1
Hypothetical protein.
       0.746
EEF76608.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.740
EEF76614.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.734
EEF76615.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.646
EEF76616.1
Hypothetical protein.
       0.620
EEF76617.1
Hypothetical protein; KEGG: pol:Bpro_5394 1.3e-11 RNA-directed DNA polymerase K00986.
       0.619
EEF76607.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.558
Your Current Organism:
Bacteroides coprophilus
NCBI taxonomy Id: 547042
Other names: B. coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus CB42, Bacteroides coprophilus DSM 18228, Bacteroides coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus JCM 13818, Bacteroides coprophilus JCM 13818 = DSM 18228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.