STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF77337.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (233 aa)    
Predicted Functional Partners:
sufS
Cysteine desulfurase, SufS subfamily; KEGG: bfr:BF0269 1.8e-166 aminotransferase K01763; Psort location: Cytoplasmic, score: 8.96; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 0.998
EEF76104.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 0.986
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.968
EEF77336.1
Hypothetical protein.
 
    0.953
sufC
KEGG: ava:Ava_0425 1.7e-81 sufC; FeS assembly ATPase SufC K09013.
  
  
 0.881
sufD
FeS assembly protein SufD; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.767
sufB
FeS assembly protein SufB; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.767
EEF75824.1
Putative FeS assembly SUF system protein; KEGG: mba:Mbar_A2421 1.6e-10 serine O-acetyltransferase / hypothetical protein (multi-domain) K00640; Psort location: Cytoplasmic, score: 8.96.
  
    0.755
EEF76961.1
Phospholipase D domain protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
   
 
 0.750
EEF77153.1
Phospholipase D domain protein; KEGG: bth:BT2046 9.3e-129 putative cardiolipin synthetase K01005; Psort location: Cytoplasmic, score: 8.96; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
   
 
 0.750
Your Current Organism:
Bacteroides coprophilus
NCBI taxonomy Id: 547042
Other names: B. coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus CB42, Bacteroides coprophilus DSM 18228, Bacteroides coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus JCM 13818, Bacteroides coprophilus JCM 13818 = DSM 18228
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