STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF77720.1Hypothetical protein. (139 aa)    
Predicted Functional Partners:
EEF77721.1
Efflux transporter, RND family, MFP subunit; KEGG: mag:amb4242 0.0088 acetyl/propionyl-CoA carboxylase, alpha subunit K01965; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.653
czcA-2
Heavy metal efflux pump, CzcA family; KEGG: eci:UTI89_C2351 2.2e-97 yegO; hypothetical protein YegO K07789; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.646
EEF77723.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.92.
       0.607
czcA
Heavy metal efflux pump, CzcA family; KEGG: eci:UTI89_C2351 4.8e-77 yegO; hypothetical protein YegO K07789; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.552
EEF77717.1
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.549
EEF77718.1
Histidine kinase; KEGG: chu:CHU_2576 3.0e-22 cheA; two-component sensor histidine kinase.
       0.535
EEF77719.1
LytTr DNA-binding domain protein; KEGG: rru:Rru_A0376 7.6e-15 transcriptional regulator, LytR/AlgR family K07705; Psort location: Cytoplasmic, score: 8.96.
       0.535
Your Current Organism:
Bacteroides coprophilus
NCBI taxonomy Id: 547042
Other names: B. coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus CB42, Bacteroides coprophilus DSM 18228, Bacteroides coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus JCM 13818, Bacteroides coprophilus JCM 13818 = DSM 18228
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