STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF78107.1Transcriptional regulator, AraC family; KEGG: bha:BH0394 3.5e-09 adaA; methylphosphotriester-DNA alkyltransferase (AraC/XylS family) K00567; Psort location: Cytoplasmic, score: 8.96. (219 aa)    
Predicted Functional Partners:
EEF77078.1
Hypothetical protein.
 
     0.773
EEF76037.1
Transcriptional regulator, AraC family; KEGG: bcz:BCZK2914 4.5e-07 adaA; methylphosphotriester-DNA alkyltransferase K00567; Psort location: Cytoplasmic, score: 8.96.
  
     0.683
EEF77672.1
Transcriptional regulator, AraC family; KEGG: bcz:BCZK2914 3.3e-12 adaA; methylphosphotriester-DNA alkyltransferase K00567; Psort location: Cytoplasmic, score: 9.26.
  
   0.677
EEF74794.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 9.1e-05 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.653
EEF76718.1
Transcriptional regulator, AraC family; KEGG: bha:BH0394 3.3e-14 adaA; methylphosphotriester-DNA alkyltransferase (AraC/XylS family) K00567.
  
   0.637
EEF76695.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 6.4e-10 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; Psort location: Cytoplasmic, score: 9.26.
  
     0.634
EEF78042.1
Transcriptional regulator, AraC family; Psort location: Cytoplasmic, score: 8.96.
  
     0.624
EEF77364.1
Class II glutamine amidotransferase; KEGG: bth:BT0553 0. glutamate synthase, large subunit K00265.
    
  0.595
nifJ
KEGG: bth:BT1747 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
     
 0.592
EEF78108.1
Hypothetical protein; KEGG: yps:YPTB1053 2.0e-05 putative aldo/keto reductase K00100.
       0.557
Your Current Organism:
Bacteroides coprophilus
NCBI taxonomy Id: 547042
Other names: B. coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus CB42, Bacteroides coprophilus DSM 18228, Bacteroides coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus JCM 13818, Bacteroides coprophilus JCM 13818 = DSM 18228
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