Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEF76216.1 | EEF78277.1 | BACCOPRO_01714 | BACCOPRO_03802 | Glycosyltransferase, group 4 family; KEGG: bfs:BF3464 1.3e-113 putative LPS biosynthesis related glycosyltransferase K02851; Psort location: CytoplasmicMembrane, score: 10.00. | Bacterial capsule synthesis protein; Psort location: Cytoplasmic, score: 8.96. | 0.439 |
| EEF76216.1 | murE | BACCOPRO_01714 | BACCOPRO_01336 | Glycosyltransferase, group 4 family; KEGG: bfs:BF3464 1.3e-113 putative LPS biosynthesis related glycosyltransferase K02851; Psort location: CytoplasmicMembrane, score: 10.00. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.713 |
| EEF78276.1 | EEF78277.1 | BACCOPRO_03801 | BACCOPRO_03802 | Hypothetical protein. | Bacterial capsule synthesis protein; Psort location: Cytoplasmic, score: 8.96. | 0.438 |
| EEF78276.1 | folD | BACCOPRO_03801 | BACCOPRO_03800 | Hypothetical protein. | Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.663 |
| EEF78276.1 | pncB | BACCOPRO_03801 | BACCOPRO_01379 | Hypothetical protein. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.451 |
| EEF78276.1 | pncB-2 | BACCOPRO_03801 | BACCOPRO_03492 | Hypothetical protein. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.451 |
| EEF78277.1 | EEF76216.1 | BACCOPRO_03802 | BACCOPRO_01714 | Bacterial capsule synthesis protein; Psort location: Cytoplasmic, score: 8.96. | Glycosyltransferase, group 4 family; KEGG: bfs:BF3464 1.3e-113 putative LPS biosynthesis related glycosyltransferase K02851; Psort location: CytoplasmicMembrane, score: 10.00. | 0.439 |
| EEF78277.1 | EEF78276.1 | BACCOPRO_03802 | BACCOPRO_03801 | Bacterial capsule synthesis protein; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein. | 0.438 |
| EEF78277.1 | folD | BACCOPRO_03802 | BACCOPRO_03800 | Bacterial capsule synthesis protein; Psort location: Cytoplasmic, score: 8.96. | Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.425 |
| EEF78277.1 | murE | BACCOPRO_03802 | BACCOPRO_01336 | Bacterial capsule synthesis protein; Psort location: Cytoplasmic, score: 8.96. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.460 |
| EEF78277.1 | pncB | BACCOPRO_03802 | BACCOPRO_01379 | Bacterial capsule synthesis protein; Psort location: Cytoplasmic, score: 8.96. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.451 |
| EEF78277.1 | pncB-2 | BACCOPRO_03802 | BACCOPRO_03492 | Bacterial capsule synthesis protein; Psort location: Cytoplasmic, score: 8.96. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.451 |
| folD | EEF78276.1 | BACCOPRO_03800 | BACCOPRO_03801 | Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Hypothetical protein. | 0.663 |
| folD | EEF78277.1 | BACCOPRO_03800 | BACCOPRO_03802 | Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Bacterial capsule synthesis protein; Psort location: Cytoplasmic, score: 8.96. | 0.425 |
| murE | EEF76216.1 | BACCOPRO_01336 | BACCOPRO_01714 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | Glycosyltransferase, group 4 family; KEGG: bfs:BF3464 1.3e-113 putative LPS biosynthesis related glycosyltransferase K02851; Psort location: CytoplasmicMembrane, score: 10.00. | 0.713 |
| murE | EEF78277.1 | BACCOPRO_01336 | BACCOPRO_03802 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | Bacterial capsule synthesis protein; Psort location: Cytoplasmic, score: 8.96. | 0.460 |
| pncB | EEF78276.1 | BACCOPRO_01379 | BACCOPRO_03801 | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | Hypothetical protein. | 0.451 |
| pncB | EEF78277.1 | BACCOPRO_01379 | BACCOPRO_03802 | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | Bacterial capsule synthesis protein; Psort location: Cytoplasmic, score: 8.96. | 0.451 |
| pncB-2 | EEF78276.1 | BACCOPRO_03492 | BACCOPRO_03801 | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | Hypothetical protein. | 0.451 |
| pncB-2 | EEF78277.1 | BACCOPRO_03492 | BACCOPRO_03802 | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | Bacterial capsule synthesis protein; Psort location: Cytoplasmic, score: 8.96. | 0.451 |