STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF78326.1Bacterial sugar transferase; KEGG: vfi:VF0352 1.8e-47 undecaprenyl-phosphate beta-glucosephosphotransferase K03606; Psort location: CytoplasmicMembrane, score: 9.82. (175 aa)    
Predicted Functional Partners:
EEF75239.1
Chain length determinant protein; KEGG: pgi:PG0436 3.5e-106 capsular polysaccharide transport protein, putative K00903.
 
 
 0.999
EEF77685.1
Chain length determinant protein; KEGG: pgi:PG0436 2.6e-149 capsular polysaccharide transport protein, putative K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.998
EEF74898.1
M protein repeat protein; KEGG: gga:374182 1.6e-18 ROCK2; Rho-associated, coiled-coil containing protein kinase 2 K04514; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.992
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.962
EEF75240.1
Polysaccharide biosynthesis/export protein.
 
 
 0.932
EEF77686.1
Polysaccharide biosynthesis/export protein.
 
 
 0.932
EEF75465.1
Hypothetical protein; KEGG: eci:UTI89_C2320 4.9e-08 wcaJ; putative colanic acid biosynthsis UDP-glucose lipid carrier transferase K03606; Psort location: CytoplasmicMembrane, score: 9.46.
 
 0.926
EEF76214.1
Polysaccharide biosynthesis/export protein.
  
 
 0.918
EEF78180.1
Polysaccharide biosynthesis/export protein; Psort location: Periplasmic, score: 9.44.
  
 
 0.918
EEF75227.1
Hypothetical protein; KEGG: tcx:Tcr_1675 4.8e-08 undecaprenyl-phosphate galactosephosphotransferase K03606; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.914
Your Current Organism:
Bacteroides coprophilus
NCBI taxonomy Id: 547042
Other names: B. coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus CB42, Bacteroides coprophilus DSM 18228, Bacteroides coprophilus DSM 18228 = JCM 13818, Bacteroides coprophilus JCM 13818, Bacteroides coprophilus JCM 13818 = DSM 18228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.