STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGG14667.1Hypothetical protein; IMG reference gene:2506377224; PFAM: TPR repeat; InterPro IPR019734:IPR013026; SPTR: Tetratricopeptide TPR_2 repeat protein; KEGG: pnu:Pnuc_1304 TPR repeat-containing protein. (346 aa)    
Predicted Functional Partners:
AGG14661.1
Condensin subunit ScpA; IMG reference gene:2506377218; PFAM: ScpA/B protein; PFAM: chromosome segregation and condensation protein ScpA; SPTR: Chromosome segregation and condensation protein ScpA; KEGG: aae:aq_423 hypothetical protein; COGs: COG1354 conserved hypothetical protein; InterPro IPR003768.
 
     0.850
AGG15276.1
IMG reference gene:2506377872; PFAM: Tetratricopeptide repeat; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; KEGG: hth:HTH_0102 hypothetical protein; InterPro IPR019734:IPR013026:IPR001440.
 
   
 0.781
AGG15223.1
ADP-heptose:LPS heptosyltransferase; IMG reference gene:2506377815; PFAM: Glycosyltransferase family 9 (heptosyltransferase); KEGG: tye:THEYE_A2047 hypothetical protein; SPTR: ADP-heptose:LPS heptosyltransferase-like protein; COGs: COG0859 ADP-heptose:LPS heptosyltransferase.
  
     0.774
AGG14639.1
ADP-heptose:LPS heptosyltransferase; IMG reference gene:2506377196; PFAM: Methyltransferase domain; Glycosyltransferase family 9 (heptosyltransferase); SPTR: ADP-heptose:LPS heptosyltransferase-like protein; KEGG: tye:THEYE_A2047 hypothetical protein; COGs: COG0859 ADP-heptose:LPS heptosyltransferase.
 
     0.773
AGG14664.1
IMG reference gene:2506377221; PFAM: Pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleotide-disulfide oxidoreductase, dimerisation domain; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; pyridine nucleotide-disulfide oxidoreductase dimerisation region; SPTR: Dihydrolipoyl dehydrogenase; KEGG: aae:aq_736 dihydrolipoamide dehydrogenase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR000815:IPR012999:IPR004099.
       0.773
AGG14665.1
Hypothetical protein; IMG reference gene:2506377222; SPTR: Putative uncharacterized protein; KEGG: hth:HTH_1210 hypothetical protein.
       0.773
AGG14666.1
IMG reference gene:2506377223; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); PFAM: peptidase M16 domain protein; SPTR: Peptidase M16 domain protein; KEGG: aae:aq_2204 processing protease; COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863.
       0.773
AGG15140.1
Flagellin/flagellar hook associated protein; IMG reference gene:2506377725; PFAM: Bacterial flagellin N-terminal helical region; SPTR: Putative uncharacterized protein; KEGG: tal:Thal_1099 flagellar hook-associated protein 3.
  
     0.772
AGG15154.1
Hypothetical protein; IMG reference gene:2506377739; SPTR: Putative uncharacterized protein; KEGG: zmn:Za10_0886 hypothetical protein.
  
     0.772
AGG15261.1
IMG reference gene:2506377856; PFAM: LysM domain; PFAM: Peptidoglycan-binding lysin domain; SPTR: Putative uncharacterized protein; KEGG: dgr:Dgri_GH12253 GH12253 gene product from transcript GH12253-RA; InterPro IPR018392.
  
     0.772
Your Current Organism:
Hydrogenobaculum sp. HO
NCBI taxonomy Id: 547144
Other names: H. sp. HO
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