Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGG15339.1Hypothetical protein; IMG reference gene:2506377938; SPTR: Putative uncharacterized protein; KEGG: hth:HTH_1608 hypothetical protein. (197 aa)    
Predicted Functional Partners:
AGG15338.1
Hypothetical protein; IMG reference gene:2506377937; SPTR: Putative uncharacterized protein; KEGG: aae:aq_1873 hypothetical protein.
       0.816
AGG15340.1
IMG reference gene:2506377939; PFAM: Putative modulator of DNA gyrase; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: Peptidase U62 modulator of DNA gyrase; KEGG: aae:aq_1871 peptide maturation; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510.
       0.816
accA
acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
       0.777
AGG15337.1
DNA topoisomerase type IA central domain protein; IMG reference gene:2506377936; PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; SPTR: DNA topoisomerase; KEGG: pmx:PERMA_A0059 DNA topoisomerase 1 (DNA topoisomerase I) (omega-protein) (relaxing enzyme) (untwisting enzyme) (swivelase); COGs: COG0550 Topoisomerase IA; InterProIPR00038 [...]
       0.777
AGG15341.1
Hypothetical protein; IMG reference gene:2506377940; SPTR: Putative uncharacterized protein; KEGG: hth:HTH_1503 hypothetical protein.
       0.532
Your Current Organism:
Hydrogenobaculum sp. HO
NCBI taxonomy Id: 547144
Other names: H. sp. HO
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