STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGG15384.1DsrE family protein; IMG reference gene:2506377983; PFAM: DsrE/DsrF-like family; PFAM: DsrE family protein; SPTR: DsrE family protein; KEGG: hth:HTH_1875 hypothetical protein; COGs: COG2044 peroxiredoxins; InterPro IPR003787. (133 aa)    
Predicted Functional Partners:
AGG15390.1
IMG reference gene:2506377989; PFAM: Pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; KEGG: hth:HTH_1881 heterodisulfide reductase subunit A; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR013027.
 
     0.915
AGG15388.1
Heterodisulfide reductase subunit C; IMG reference gene:2506377987; PFAM: 4Fe-4S dicluster domain; SPTR: Heterodisulfide reductase subunit C; KEGG: hth:HTH_1879 heterodisulfide reductase subunit C; COGs: COG1150 Heterodisulfide reductase subunit C; InterPro IPR017900:IPR017896.
 
   
 0.906
AGG15389.1
Hypothetical protein; IMG reference gene:2506377988; SPTR: Putative uncharacterized protein; KEGG: hth:HTH_1880 hypothetical protein.
 
     0.902
AGG15391.1
Heterodisulfide reductase, subunit B; IMG reference gene:2506377990; PFAM: Cysteine-rich domain; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: Putative uncharacterized protein; KEGG: hth:HTH_1882 heterodisulfide reductase subunit B; COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017.
 
  
 0.895
AGG15387.1
CoB--CoM heterodisulfide reductase; IMG reference gene:2506377986; PFAM: Cysteine-rich domain; PRIAM: CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: CoB--CoM heterodisulfide reductase; KEGG: hth:HTH_1878 heterodisulfide reductase subunit B; COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017.
 
  
 0.885
AGG15381.1
IMG reference gene:2506377980; PFAM: Radical SAM superfamily; PFAM: Radical SAM domain protein; COGs: COG1856 Uncharacterized homolog of biotin synthetase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; KEGG: aae:aq_403 hypothetical protein; InterPro IPR007197:IPR006638.
 
     0.873
AGG15392.1
Heterodisulfide reductase subunit C; IMG reference gene:2506377991; PFAM: 4Fe-4S dicluster domain; SPTR: Putative uncharacterized protein; KEGG: hth:HTH_1883 heterodisulfide reductase subunit C; COGs: COG1150 Heterodisulfide reductase subunit C; InterPro IPR017900:IPR017896.
 
   
 0.870
AGG15393.1
Peroxiredoxins-like protein; IMG reference gene:2506377992; PFAM: DsrE/DsrF-like family; manually curated; SPTR: Putative uncharacterized protein; KEGG: tal:Thal_1349 peroxiredoxins-like protein; COGs: COG2044 peroxiredoxins.
 
     0.863
AGG15386.1
Glycine cleavage H-protein; IMG reference gene:2506377985; PFAM: Glycine cleavage H-protein; PFAM: glycine cleavage H-protein; SPTR: Glycine cleavage H-protein; KEGG: tal:Thal_1342 glycine cleavage H-protein; COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); InterPro IPR003016:IPR002930.
 
    0.841
AGG14914.1
IMG reference gene:2506377479; PFAM: Radical SAM superfamily; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; KEGG: hth:HTH_1871 biotin synthase-related protein; COGs: COG2516 Biotin synthase-related protein; InterPro IPR006638:IPR007197.
 
     0.781
Your Current Organism:
Hydrogenobaculum sp. HO
NCBI taxonomy Id: 547144
Other names: H. sp. HO
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