STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGG15597.1ATPase; IMG reference gene:2506378201; PFAM: AAA domain; Domain of unknown function (DUF4143); SPTR: ATPase; KEGG: ppd:Ppro_0262 ATPase; COGs: COG1373 ATPase (AAA+ superfamily). (431 aa)    
Predicted Functional Partners:
AGG15598.1
Dehydrogenase; IMG reference gene:2506378202; PFAM: Enoyl-(Acyl carrier protein) reductase; SPTR: Pteridine reductase; KEGG: aae:aq_1010 dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347.
       0.774
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
       0.541
AGG15591.1
Hypothetical protein; IMG reference gene:2506378195; SPTR: Putative uncharacterized protein; KEGG: tal:Thal_0907 hypothetical protein.
       0.541
AGG15592.1
6-pyruvoyl-tetrahydropterin synthase; IMG reference gene:2506378196; PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: 6-pyruvoyl tetrahydropterin synthase/QueD family protein; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; SPTR: Putative uncharacterized protein; KEGG: tal:Thal_0116 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115.
       0.541
AGG15593.1
Hypothetical protein; IMG reference gene:2506378197; SPTR: Putative uncharacterized protein; KEGG: hth:HTH_1039 hypothetical protein.
       0.541
AGG15594.1
DsrE-like protein; IMG reference gene:2506378198; PFAM: DsrE/DsrF-like family; SPTR: Putative uncharacterized protein; KEGG: hth:HTH_1040 DsrE-like protein.
       0.541
AGG15595.1
Putative peroxiredoxin; IMG reference gene:2506378199; PFAM: DsrE/DsrF-like family; SPTR: Putative uncharacterized protein; KEGG: hth:HTH_1041 hypothetical protein.
       0.541
AGG15596.1
IMG reference gene:2506378200; PFAM: SirA-like protein; PFAM: SirA-like domain-containing protein; SPTR: SirA family protein; KEGG: hth:HTH_1042 SirA family protein; InterPro IPR001455; Belongs to the sulfur carrier protein TusA family.
       0.541
AGG14445.1
Filamentation induced by cAMP protein Fic; IMG reference gene:2506376990; PFAM: Fic/DOC family N-terminal; Fic/DOC family; PFAM: filamentation induced by cAMP protein Fic; SPTR: Filamentation induced by cAMP protein Fic; KEGG: dar:Daro_3955 filamentation induced by cAMP protein Fic; COGs: COG3177 conserved hypothetical protein; InterPro IPR003812.
 
     0.412
Your Current Organism:
Hydrogenobaculum sp. HO
NCBI taxonomy Id: 547144
Other names: H. sp. HO
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