Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFB84117.1 | SFB84155.1 | SAMN05216284_101315 | SAMN05216284_101316 | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily. | 0.888 |
SFB84117.1 | SFB84175.1 | SAMN05216284_101315 | SAMN05216284_101317 | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | Xylose isomerase-like TIM barrel. | 0.864 |
SFB84117.1 | SFB84196.1 | SAMN05216284_101315 | SAMN05216284_101318 | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | Hypothetical protein. | 0.888 |
SFB84117.1 | SFB84220.1 | SAMN05216284_101315 | SAMN05216284_101319 | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | Hypothetical protein. | 0.833 |
SFB84117.1 | SFC76936.1 | SAMN05216284_101315 | SAMN05216284_10793 | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | Phytoene synthase. | 0.925 |
SFB84117.1 | SFC80361.1 | SAMN05216284_101315 | SAMN05216284_107218 | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.835 |
SFB84117.1 | SFD11377.1 | SAMN05216284_101315 | SAMN05216284_11160 | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | Short-chain Z-isoprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.950 |
SFB84117.1 | SFD24238.1 | SAMN05216284_101315 | SAMN05216284_113144 | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.875 |
SFB84117.1 | idi | SAMN05216284_101315 | SAMN05216284_10790 | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.920 |
SFB84117.1 | ispH | SAMN05216284_101315 | SAMN05216284_11176 | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.900 |
SFB84155.1 | SFB84117.1 | SAMN05216284_101316 | SAMN05216284_101315 | Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily. | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | 0.888 |
SFB84155.1 | SFB84175.1 | SAMN05216284_101316 | SAMN05216284_101317 | Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily. | Xylose isomerase-like TIM barrel. | 0.965 |
SFB84155.1 | SFB84196.1 | SAMN05216284_101316 | SAMN05216284_101318 | Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily. | Hypothetical protein. | 0.972 |
SFB84155.1 | SFB84220.1 | SAMN05216284_101316 | SAMN05216284_101319 | Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily. | Hypothetical protein. | 0.964 |
SFB84175.1 | SFB84117.1 | SAMN05216284_101317 | SAMN05216284_101315 | Xylose isomerase-like TIM barrel. | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | 0.864 |
SFB84175.1 | SFB84155.1 | SAMN05216284_101317 | SAMN05216284_101316 | Xylose isomerase-like TIM barrel. | Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily. | 0.965 |
SFB84175.1 | SFB84196.1 | SAMN05216284_101317 | SAMN05216284_101318 | Xylose isomerase-like TIM barrel. | Hypothetical protein. | 0.965 |
SFB84175.1 | SFB84220.1 | SAMN05216284_101317 | SAMN05216284_101319 | Xylose isomerase-like TIM barrel. | Hypothetical protein. | 0.957 |
SFB84196.1 | SFB84117.1 | SAMN05216284_101318 | SAMN05216284_101315 | Hypothetical protein. | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | 0.888 |
SFB84196.1 | SFB84155.1 | SAMN05216284_101318 | SAMN05216284_101316 | Hypothetical protein. | Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily. | 0.972 |
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