Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFB88442.1 | SFC19790.1 | SAMN05216284_101478 | SAMN05216284_103155 | Glutamate synthase (NADPH/NADH) large chain. | LacI family transcriptional regulator. | 0.932 |
SFB88442.1 | SFC51319.1 | SAMN05216284_101478 | SAMN05216284_10572 | Glutamate synthase (NADPH/NADH) large chain. | LacI family transcriptional regulator. | 0.932 |
SFB88442.1 | SFC53239.1 | SAMN05216284_101478 | SAMN05216284_105147 | Glutamate synthase (NADPH/NADH) large chain. | Amino acid adenylation domain-containing protein. | 0.750 |
SFB88442.1 | SFD19167.1 | SAMN05216284_101478 | SAMN05216284_112174 | Glutamate synthase (NADPH/NADH) large chain. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.932 |
SFB88442.1 | SFD74782.1 | SAMN05216284_101478 | SAMN05216284_12391 | Glutamate synthase (NADPH/NADH) large chain. | Phosphopantetheine attachment site. | 0.750 |
SFB88442.1 | cysC | SAMN05216284_101478 | SAMN05216284_10968 | Glutamate synthase (NADPH/NADH) large chain. | Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate. | 0.773 |
SFB88442.1 | guaA | SAMN05216284_101478 | SAMN05216284_10928 | Glutamate synthase (NADPH/NADH) large chain. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.964 |
SFB88442.1 | pheT | SAMN05216284_101478 | SAMN05216284_10836 | Glutamate synthase (NADPH/NADH) large chain. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.902 |
SFB88442.1 | ribBA | SAMN05216284_101478 | SAMN05216284_10848 | Glutamate synthase (NADPH/NADH) large chain. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.545 |
SFC19761.1 | SFC19790.1 | SAMN05216284_103154 | SAMN05216284_103155 | Beta-fructofuranosidase. | LacI family transcriptional regulator. | 0.735 |
SFC19790.1 | SFB88442.1 | SAMN05216284_103155 | SAMN05216284_101478 | LacI family transcriptional regulator. | Glutamate synthase (NADPH/NADH) large chain. | 0.932 |
SFC19790.1 | SFC19761.1 | SAMN05216284_103155 | SAMN05216284_103154 | LacI family transcriptional regulator. | Beta-fructofuranosidase. | 0.735 |
SFC19790.1 | SFC51319.1 | SAMN05216284_103155 | SAMN05216284_10572 | LacI family transcriptional regulator. | LacI family transcriptional regulator. | 0.666 |
SFC19790.1 | SFC53239.1 | SAMN05216284_103155 | SAMN05216284_105147 | LacI family transcriptional regulator. | Amino acid adenylation domain-containing protein. | 0.750 |
SFC19790.1 | SFD19167.1 | SAMN05216284_103155 | SAMN05216284_112174 | LacI family transcriptional regulator. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.726 |
SFC19790.1 | SFD74782.1 | SAMN05216284_103155 | SAMN05216284_12391 | LacI family transcriptional regulator. | Phosphopantetheine attachment site. | 0.750 |
SFC19790.1 | cysC | SAMN05216284_103155 | SAMN05216284_10968 | LacI family transcriptional regulator. | Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate. | 0.531 |
SFC19790.1 | guaA | SAMN05216284_103155 | SAMN05216284_10928 | LacI family transcriptional regulator. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.505 |
SFC19790.1 | pheT | SAMN05216284_103155 | SAMN05216284_10836 | LacI family transcriptional regulator. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.505 |
SFC19790.1 | ribBA | SAMN05216284_103155 | SAMN05216284_10848 | LacI family transcriptional regulator. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.505 |
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